Package: htce 0.1.0
htce: A set of internal tools for managing high-throughput assay data at NEB
What the package does (one paragraph).
Authors:
htce_0.1.0.tar.gz
htce_0.1.0.zip(r-4.5)htce_0.1.0.zip(r-4.4)htce_0.1.0.zip(r-4.3)
htce_0.1.0.tgz(r-4.4-any)htce_0.1.0.tgz(r-4.3-any)
htce_0.1.0.tar.gz(r-4.5-noble)htce_0.1.0.tar.gz(r-4.4-noble)
htce_0.1.0.tgz(r-4.4-emscripten)htce_0.1.0.tgz(r-4.3-emscripten)
htce.pdf |htce.html✨
htce/json (API)
# Install 'htce' in R: |
install.packages('htce', repos = c('https://eric-hunt.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/eric-hunt/htce/issues
Last updated 5 months agofrom:92ab8341be. Checks:OK: 1 WARNING: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 08 2024 |
R-4.5-win | WARNING | Nov 08 2024 |
R-4.5-linux | WARNING | Nov 08 2024 |
R-4.4-win | WARNING | Nov 08 2024 |
R-4.4-mac | WARNING | Nov 08 2024 |
R-4.3-win | WARNING | Nov 08 2024 |
R-4.3-mac | WARNING | Nov 08 2024 |
Exports:address_to_well_idbarcode_to_plate_idcount_newlinesdkdb_collectdkdb_executedkdb_lookupexisting_barcodesfatools_matrixfind_skipsmake_submission_filesmake_well_ordernew_fatools_matrixtidyvalidate_fatools_matrixwith_duckdb_connection
Dependencies:assertthatclidata.tableDBIduckdbfansigenericsgluelifecyclemagrittrpillarpkgconfigrlangtibbleutf8vctrswithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Retrieve a well_id from barcode and address strings | address_to_well_id |
Retrieve a plate_id from a barcode string | barcode_to_plate_id |
Return the number of lines in a file | count_newlines |
DuckDB Query | db_query dkdb_collect dkdb_execute |
Lookup something by a set of attributes and return the 'id' or a Boolean value indicating if it already exists | dkdb_lookup |
Title | existing_barcodes |
Title | fatools_matrix |
Find and return skip values | find_skips |
Create CE submission files | make_submission_files |
Create a vector of well addresses | make_well_order |
Title | new_fatools_matrix |
Title | tidy.fatools_matrix |
Title | validate_fatools_matrix |
DuckDB Connection | with_duckdb_connection |